Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | FBD94_04300 | Not Available | Positive | 1095176 - 1095958 | 29782.2 |
| dihydrofolate reductase | FBD94_04305 | Not Available | Positive | 1096023 - 1096553 | 19835.9 |
| gnat family n-acetyltransferase | FBD94_04310 | Not Available | Negative | 1096550 - 1097059 | 19073.6 |
| short chain dehydrogenase | FBD94_04315 | Not Available | Negative | 1097144 - 1097743 | 21285.8 |
| hypothetical protein | FBD94_04320 | Not Available | Negative | 1097787 - 1098017 | 8758.41 |
| helix-turn-helix domain-containing protein | FBD94_04325 | Not Available | Negative | 1098106 - 1099125 | 38822.9 |
| arac family transcriptional regulator | FBD94_04330 | Not Available | Negative | 1099034 - 1099906 | 33670.5 |
| siderophore-interacting protein | FBD94_04335 | Not Available | Negative | 1099916 - 1100611 | 25815.2 |
| hit family protein | FBD94_04340 | Not Available | Negative | 1100709 - 1101134 | 15893.0 |
| gntr family transcriptional regulator | FBD94_04345 | Not Available | Negative | 1101244 - 1102275 | 38739.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

