Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallophosphoesterase | FBD94_04250 | Not Available | Positive | 1078116 - 1078961 | 31831.8 |
| hypothetical protein | FBD94_04255 | Not Available | Positive | 1078981 - 1079772 | 28617.0 |
| bifunctional ynce family protein/alkaline phosphatase family protein | FBD94_04260 | Not Available | Positive | 1079782 - 1082223 | 89169.8 |
| laci family transcriptional regulator | FBD94_04265 | Not Available | Negative | 1082274 - 1083287 | 37527.2 |
| inositol oxygenase | FBD94_04270 | Not Available | Positive | 1083434 - 1084324 | 35428.4 |
| tonb-dependent receptor | FBD94_04275 | Not Available | Positive | 1084430 - 1087444 | 108827.0 |
| ragb/susd family nutrient uptake outer membrane protein | FBD94_04280 | Not Available | Positive | 1087456 - 1089129 | 62408.4 |
| sodium/solute symporter | FBD94_04285 | Not Available | Positive | 1089273 - 1090901 | 59526.1 |
| ph domain-containing protein | FBD94_04290 | Not Available | Positive | 1091003 - 1091383 | 14062.0 |
| cytochrome c biogenesis protein ccsb | FBD94_04295 | Not Available | Negative | 1091440 - 1094787 | 124229.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

