Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FBD94_04150 | Not Available | Negative | 1057511 - 1058635 | 42279.8 |
| hypothetical protein | FBD94_04155 | Not Available | Negative | 1059241 - 1059492 | 9686.35 |
| hypothetical protein | FBD94_04160 | Not Available | Positive | 1059599 - 1059904 | 11224.2 |
| hypothetical protein | FBD94_04165 | Not Available | Negative | 1060048 - 1060617 | 21779.9 |
| hypothetical protein | FBD94_04170 | Not Available | Negative | 1060821 - 1061942 | 41904.5 |
| hybrid sensor histidine kinase/response regulator | FBD94_04175 | Not Available | Negative | 1061944 - 1063527 | 58428.7 |
| hamp domain-containing histidine kinase | FBD94_04180 | Not Available | Negative | 1063545 - 1064774 | 45013.9 |
| photoactive yellow protein | FBD94_04185 | Not Available | Negative | 1064776 - 1065129 | 13290.8 |
| hypothetical protein | FBD94_04190 | Not Available | Negative | 1066308 - 1066979 | 25704.7 |
| lmo0937 family membrane protein | FBD94_04195 | Not Available | Negative | 1067064 - 1067213 | 5267.94 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

