Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1905 domain-containing protein | FBD94_04050 | Not Available | Positive | 1038337 - 1038852 | 19788.2 |
| polyprenol monophosphomannose synthase | FBD94_04055 | Not Available | Negative | 1038855 - 1039586 | 28155.2 |
| peptide mfs transporter | FBD94_04060 | Not Available | Negative | 1039680 - 1041173 | 55703.4 |
| peptide mfs transporter | FBD94_04065 | Not Available | Negative | 1041258 - 1043027 | 65438.8 |
| hypothetical protein | FBD94_04070 | Not Available | Negative | 1043130 - 1044056 | 35196.5 |
| acetyl-coa c-acyltransferase | FBD94_04075 | Not Available | Negative | 1044057 - 1045235 | 40852.8 |
| hdig domain-containing protein | FBD94_04080 | Not Available | Positive | 1045406 - 1047487 | 79259.9 |
| Trna-ser | Not Available | Not Available | Positive | 1047557 - 1047643 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 1047733 - 1047809 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 1047861 - 1047937 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

