Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FBD94_03950 | Not Available | Negative | 1016728 - 1017912 | 44176.0 |
| aspartate kinase | FBD94_03955 | Not Available | Negative | 1017919 - 1019193 | 48413.4 |
| duf3298 and duf4163 domain-containing protein | FBD94_03960 | Not Available | Negative | 1019197 - 1020009 | 30768.4 |
| gnat family n-acetyltransferase | FBD94_03965 | Not Available | Negative | 1020011 - 1020478 | 17944.3 |
| yggs family pyridoxal phosphate-dependent enzyme | FBD94_03970 | Not Available | Negative | 1020485 - 1021177 | 26145.7 |
| duf4296 domain-containing protein | FBD94_03975 | Not Available | Positive | 1021248 - 1021826 | 21962.8 |
| endonuclease muts2 | FBD94_03980 | Not Available | Positive | 1021829 - 1024201 | 89516.9 |
| pqq-dependent sugar dehydrogenase | FBD94_03985 | Not Available | Positive | 1024268 - 1025365 | 39890.5 |
| coa transferase subunit a | FBD94_03990 | Not Available | Positive | 1025418 - 1026119 | 25378.6 |
| coa transferase subunit b | FBD94_03995 | Not Available | Positive | 1026137 - 1026793 | 23346.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

