Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nifu family protein | FBD94_03900 | Not Available | Negative | 1004613 - 1005164 | 20290.0 |
| adenylosuccinate lyase | FBD94_03905 | Not Available | Negative | 1005255 - 1006601 | 50833.5 |
| hypothetical protein | FBD94_03910 | Not Available | Negative | 1007510 - 1007722 | 7231.37 |
| sigma-70 family rna polymerase sigma factor | FBD94_03915 | Not Available | Positive | 1008241 - 1008807 | 21868.0 |
| trypsin-like peptidase domain-containing protein | FBD94_03920 | Not Available | Positive | 1008815 - 1009906 | 39970.6 |
| hypothetical protein | FBD94_03925 | Not Available | Negative | 1009994 - 1010176 | 7235.6 |
| duf72 domain-containing protein | FBD94_03930 | Not Available | Positive | 1010817 - 1011761 | 36211.2 |
| peroxiredoxin | FBD94_03935 | Not Available | Positive | 1011835 - 1012470 | 23619.0 |
| hypothetical protein | FBD94_03940 | Not Available | Positive | 1012876 - 1013424 | 21460.9 |
| duf2723 domain-containing protein | FBD94_03945 | Not Available | Negative | 1013608 - 1016604 | 112923.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

