Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | FBD94_03850 | Not Available | Negative | 993236 - 993988 | 26702.9 |
| duf1097 domain-containing protein | FBD94_03855 | Not Available | Negative | 994012 - 994503 | 17806.5 |
| sdr family oxidoreductase | FBD94_03860 | Not Available | Negative | 994555 - 995295 | 26211.3 |
| hypothetical protein | FBD94_03865 | Not Available | Positive | 995385 - 995762 | 14300.4 |
| duf1028 domain-containing protein | FBD94_03870 | Not Available | Positive | 996056 - 996766 | 25562.2 |
| helix-turn-helix domain-containing protein | FBD94_03875 | Not Available | Positive | 996940 - 997875 | 36090.7 |
| phage tail protein | FBD94_03880 | Not Available | Positive | 998100 - 998645 | 19651.3 |
| hypothetical protein | FBD94_03885 | Not Available | Positive | 998674 - 999222 | 19464.4 |
| phage tail protein | FBD94_03890 | Not Available | Positive | 999257 - 999760 | 17870.1 |
| hypothetical protein | FBD94_03895 | Not Available | Positive | 999771 - 1004275 | 152543.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

