Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | FBD94_03795 | Not Available | Negative | 983153 - 983944 | 28892.7 |
| antibiotic biosynthesis monooxygenase | FBD94_03805 | Not Available | Positive | 986318 - 986641 | 12103.8 |
| tetr/acrr family transcriptional regulator | FBD94_03810 | Not Available | Positive | 986970 - 987557 | 21911.8 |
| hypothetical protein | FBD94_03815 | Not Available | Positive | 987668 - 988345 | 26215.9 |
| hypothetical protein | FBD94_03820 | Not Available | Positive | 988361 - 988816 | 17122.9 |
| sdr family nad(p)-dependent oxidoreductase | FBD94_03825 | Not Available | Positive | 988864 - 989682 | 29919.9 |
| nadp-dependent oxidoreductase | FBD94_03830 | Not Available | Positive | 989712 - 990638 | 32943.6 |
| alpha/beta hydrolase | FBD94_03835 | Not Available | Positive | 990670 - 991530 | 31291.2 |
| hypothetical protein | FBD94_03840 | Not Available | Positive | 991690 - 992040 | 13026.2 |
| helix-turn-helix domain-containing protein | FBD94_03845 | Not Available | Positive | 992196 - 993137 | 36788.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

