Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair protein | FBD94_03745 | Not Available | Positive | 970063 - 971412 | 51194.0 |
| hypothetical protein | FBD94_03750 | Not Available | Positive | 971409 - 972749 | 50769.2 |
| hypothetical protein | FBD94_03755 | Not Available | Positive | 972838 - 973086 | 9473.45 |
| sdr family nad(p)-dependent oxidoreductase | FBD94_03760 | Not Available | Negative | 973281 - 974117 | 30499.3 |
| nuclear transport factor 2 family protein | FBD94_03765 | Not Available | Negative | 974146 - 974547 | 15117.3 |
| aldo/keto reductase | FBD94_03770 | Not Available | Negative | 974676 - 975557 | 32824.2 |
| hd domain-containing protein | FBD94_03775 | Not Available | Negative | 975795 - 976445 | 24344.9 |
| sdr family oxidoreductase | FBD94_03780 | Not Available | Negative | 976484 - 977236 | 26831.1 |
| sdr family oxidoreductase | FBD94_03785 | Not Available | Negative | 977355 - 978095 | 26295.3 |
| aaa family atpase | FBD94_03790 | Not Available | Positive | 981210 - 982898 | 64048.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

