Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylformylglycinamidine cyclo-ligase | FBD94_03645 | Not Available | Negative | 942849 - 944030 | 42917.9 |
| glutamine synthetase type iii | FBD94_03650 | Not Available | Negative | 944118 - 946304 | 81528.6 |
| hypothetical protein | FBD94_03655 | Not Available | Negative | 946496 - 947410 | 35548.9 |
| duf2339 domain-containing protein | FBD94_03660 | Not Available | Negative | 947400 - 949826 | 90707.0 |
| duf2807 domain-containing protein | FBD94_03665 | Not Available | Negative | 949883 - 950614 | 25301.2 |
| hypothetical protein | FBD94_03670 | Not Available | Negative | 950735 - 950977 | 9140.9 |
| hypothetical protein | FBD94_03675 | Not Available | Negative | 951104 - 952066 | 35839.5 |
| phosphoribosylformylglycinamidine synthase | FBD94_03680 | Not Available | Negative | 952174 - 955842 | 133953.0 |
| methyltransferase domain-containing protein | FBD94_03685 | Not Available | Positive | 956007 - 956711 | 26235.2 |
| metallophosphoesterase family protein | FBD94_03690 | Not Available | Positive | 956718 - 957209 | 18612.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

