Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5009 domain-containing protein | FBD94_03595 | Not Available | Positive | 931610 - 933004 | 51904.1 |
| ampg family muropeptide mfs transporter | FBD94_03600 | Not Available | Positive | 933103 - 934353 | 46110.3 |
| gdsl family lipase | FBD94_03605 | Not Available | Positive | 934387 - 935061 | 25070.9 |
| gdsl family lipase | FBD94_03610 | Not Available | Positive | 935084 - 935755 | 25641.5 |
| duf4434 domain-containing protein | FBD94_03615 | Not Available | Positive | 935752 - 936687 | 35949.4 |
| age family epimerase/isomerase | FBD94_03620 | Not Available | Positive | 936696 - 937916 | 47572.6 |
| hypothetical protein | FBD94_03625 | Not Available | Positive | 938001 - 938882 | 33178.7 |
| s46 family peptidase | FBD94_03630 | Not Available | Positive | 938971 - 941133 | 80990.1 |
| voc family protein | FBD94_03635 | Not Available | Positive | 941384 - 941791 | 15356.0 |
| g-d-s-l family lipolytic protein | FBD94_03640 | Not Available | Positive | 941883 - 942824 | 35012.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

