Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | FBD94_03495 | Not Available | Positive | 903333 - 904316 | 36779.4 |
| port family protein | FBD94_03500 | Not Available | Positive | 904327 - 904944 | 22718.5 |
| glyceraldehyde-3-phosphate dehydrogenase | FBD94_03505 | Not Available | Negative | 904975 - 906423 | 53646.5 |
| rna polymerase sigma factor rpod/siga | FBD94_03510 | Not Available | Negative | 906520 - 907380 | 32664.1 |
| duf1508 domain-containing protein | FBD94_03515 | Not Available | Negative | 907725 - 908054 | 12024.8 |
| mbl fold metallo-hydrolase | FBD94_03520 | Not Available | Negative | 908137 - 908976 | 32069.2 |
| dihydrolipoyl dehydrogenase | FBD94_03525 | Not Available | Negative | 909114 - 910502 | 48815.0 |
| tonb-dependent receptor | FBD94_03530 | Not Available | Positive | 910836 - 914012 | 115948.0 |
| sigma-70 family rna polymerase sigma factor | FBD94_03535 | Not Available | Negative | 914307 - 914867 | 21777.6 |
| rna-binding protein | FBD94_03540 | Not Available | Positive | 915190 - 915498 | 11277.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

