Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exosortase k | FBD94_03445 | Not Available | Negative | 895260 - 895793 | 20438.5 |
| duf4173 domain-containing protein | FBD94_03450 | Not Available | Negative | 895799 - 897367 | 60446.8 |
| transcriptional regulator | FBD94_03455 | Not Available | Negative | 897509 - 897805 | 11028.6 |
| hypothetical protein | FBD94_03460 | Not Available | Negative | 897805 - 898434 | 23418.1 |
| abc transporter atp-binding protein | FBD94_03465 | Not Available | Positive | 898555 - 899205 | 23589.7 |
| hypothetical protein | FBD94_03470 | Not Available | Positive | 899202 - 899525 | 11835.2 |
| haloacid dehalogenase | FBD94_03475 | Not Available | Positive | 899525 - 900133 | 24096.2 |
| hypothetical protein | FBD94_03480 | Not Available | Positive | 900176 - 901855 | 60648.6 |
| hypothetical protein | FBD94_03485 | Not Available | Positive | 901973 - 902242 | 10054.0 |
| m28 family peptidase | FBD94_03490 | Not Available | Negative | 902246 - 903187 | 35233.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

