Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf59 domain-containing protein | FBD94_03345 | Not Available | Positive | 870641 - 870955 | 11895.5 |
| rrf2 family transcriptional regulator | FBD94_03350 | Not Available | Positive | 870974 - 871435 | 16933.5 |
| bifunctional udp-n-acetylmuramoyl-tripeptide:d-alanyl-d-alanine ligase/alanine racemase | FBD94_03355 | Not Available | Positive | 871536 - 873989 | 90841.6 |
| duf502 domain-containing protein | FBD94_03360 | Not Available | Positive | 874033 - 874626 | 21779.1 |
| arsenate reductase (glutaredoxin) | FBD94_03365 | Not Available | Positive | 874793 - 875137 | 12978.8 |
| tigr00730 family rossman fold protein | FBD94_03370 | Not Available | Negative | 875313 - 876020 | 26808.4 |
| sodium:solute symporter | FBD94_03375 | Not Available | Negative | 876034 - 877542 | 56043.4 |
| recombination protein recr | FBD94_03380 | Not Available | Positive | 877612 - 878229 | 22824.6 |
| sdr family oxidoreductase | FBD94_03385 | Not Available | Positive | 878235 - 879050 | 29462.2 |
| anthranilate phosphoribosyltransferase | FBD94_03390 | Not Available | Positive | 879270 - 880259 | 36050.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

