Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sialate o-acetylesterase | FBD94_03295 | Not Available | Positive | 855235 - 857247 | 75095.2 |
| fad-dependent oxidoreductase | FBD94_03300 | Not Available | Positive | 857263 - 859539 | 84261.5 |
| sodium/solute symporter | FBD94_03305 | Not Available | Positive | 859587 - 861236 | 59526.6 |
| t9ss type b sorting domain-containing protein | FBD94_03310 | Not Available | Positive | 861388 - 864423 | 109207.0 |
| type ix secretion system membrane protein porp/sprf | FBD94_03315 | Not Available | Positive | 864435 - 865319 | 32150.5 |
| fe-s cluster assembly protein sufb | FBD94_03320 | Not Available | Positive | 865429 - 866874 | 53922.2 |
| fe-s cluster assembly atpase sufc | FBD94_03325 | Not Available | Positive | 866893 - 867651 | 28012.8 |
| fe-s cluster assembly protein sufd | FBD94_03330 | Not Available | Positive | 867676 - 868974 | 48346.3 |
| cysteine desulfurase | FBD94_03335 | Not Available | Positive | 868976 - 870190 | 44195.4 |
| sufe family protein | FBD94_03340 | Not Available | Positive | 870190 - 870648 | 17136.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

