Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 843612 - 843687 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 843754 - 843841 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 843880 - 843955 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 844017 - 844101 | Not Available |
| glycoside hydrolase family 16 protein | FBD94_03265 | Not Available | Positive | 844326 - 845174 | 33103.5 |
| tonb-dependent receptor | FBD94_03270 | Not Available | Positive | 845249 - 848329 | 113212.0 |
| ragb/susd family nutrient uptake outer membrane protein | FBD94_03275 | Not Available | Positive | 848348 - 849970 | 61531.2 |
| laci family transcriptional regulator | FBD94_03280 | Not Available | Negative | 850118 - 851131 | 37431.4 |
| glycoside hydrolase family 97 protein | FBD94_03285 | Not Available | Positive | 851345 - 853207 | 70129.5 |
| beta-galactosidase | FBD94_03290 | Not Available | Positive | 853219 - 855216 | 74963.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

