Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | FBD94_03195 | Not Available | Positive | 834048 - 835064 | 36891.0 |
| hypothetical protein | FBD94_03200 | Not Available | Negative | 835317 - 836357 | 39994.6 |
| alpha/beta hydrolase | FBD94_03205 | Not Available | Negative | 836537 - 837409 | 32418.0 |
| abc transporter permease | FBD94_03210 | Not Available | Positive | 837505 - 837933 | 16021.7 |
| voc family protein | FBD94_03215 | Not Available | Negative | 837935 - 838327 | 14224.8 |
| voc family protein | FBD94_03220 | Not Available | Positive | 838388 - 838771 | 14770.7 |
| Trna-cys | Not Available | Not Available | Positive | 838856 - 838929 | Not Available |
| dinb family protein | FBD94_03230 | Not Available | Positive | 839253 - 839747 | 19057.7 |
| asma family protein | FBD94_03235 | Not Available | Positive | 839844 - 842963 | 115152.0 |
| regulatory protein recx | FBD94_03240 | Not Available | Positive | 842992 - 843483 | 19214.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

