Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heavy-metal-associated domain-containing protein | FBD94_03145 | Not Available | Positive | 824852 - 825064 | 7771.26 |
| hypothetical protein | FBD94_03150 | Not Available | Positive | 825141 - 825539 | 14953.1 |
| heavy-metal-associated domain-containing protein | FBD94_03155 | Not Available | Positive | 825671 - 826021 | 12510.1 |
| efflux rnd transporter permease subunit | FBD94_03160 | Not Available | Positive | 826053 - 827351 | 48372.8 |
| efflux rnd transporter permease subunit | FBD94_03165 | Not Available | Positive | 827348 - 829285 | 71495.5 |
| tolc family protein | FBD94_03170 | Not Available | Positive | 829272 - 830525 | 47788.8 |
| biotin/lipoyl-binding protein | FBD94_03175 | Not Available | Positive | 830503 - 831714 | 43320.5 |
| efflux rnd transporter periplasmic adaptor subunit | FBD94_03180 | Not Available | Positive | 831738 - 832955 | 44756.1 |
| duf3347 domain-containing protein | FBD94_03185 | Not Available | Positive | 832989 - 833552 | 19768.4 |
| duf2147 domain-containing protein | FBD94_03190 | Not Available | Positive | 833616 - 834047 | 16174.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

