Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | FBD94_03095 | Not Available | Negative | 796695 - 797261 | 21780.6 |
| duf92 domain-containing protein | FBD94_03100 | Not Available | Negative | 797258 - 797971 | 25017.5 |
| hypothetical protein | FBD94_03105 | Not Available | Positive | 798580 - 803124 | 150921.0 |
| tail fiber domain-containing protein | FBD94_03110 | Not Available | Positive | 803150 - 806551 | 119400.0 |
| redoxin domain-containing protein | FBD94_03115 | Not Available | Positive | 806596 - 808035 | 54508.8 |
| gliding motility-associated c-terminal domain-containing protein | FBD94_03120 | Not Available | Positive | 808045 - 808824 | 29123.9 |
| type ix secretion system membrane protein porp/sprf | FBD94_03125 | Not Available | Positive | 808844 - 809746 | 33499.3 |
| hypothetical protein | FBD94_03130 | Not Available | Positive | 809749 - 821532 | 412421.0 |
| alpha/beta hydrolase | FBD94_03135 | Not Available | Positive | 821564 - 822400 | 31795.5 |
| copper-translocating p-type atpase | FBD94_03140 | Not Available | Positive | 822497 - 824737 | 80108.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

