Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FBD94_02995 | Not Available | Negative | 777460 - 778086 | 24423.4 |
| crp/fnr family transcriptional regulator | FBD94_03000 | Not Available | Positive | 778330 - 778908 | 22227.8 |
| hypothetical protein | FBD94_03005 | Not Available | Positive | 779001 - 779513 | 18304.8 |
| hypothetical protein | FBD94_03010 | Not Available | Positive | 779529 - 779918 | 13246.9 |
| acetyltransferase | FBD94_03015 | Not Available | Negative | 780231 - 780734 | 19508.5 |
| helix-turn-helix domain-containing protein | FBD94_03020 | Not Available | Negative | 780763 - 781740 | 37139.2 |
| doxx family protein | FBD94_03025 | Not Available | Positive | 781876 - 782337 | 17071.3 |
| glyoxalase | FBD94_03030 | Not Available | Positive | 782303 - 782674 | 14102.8 |
| hypothetical protein | FBD94_03035 | Not Available | Negative | 782671 - 782925 | 9403.72 |
| sigma-70 family rna polymerase sigma factor | FBD94_03040 | Not Available | Positive | 783087 - 783707 | 23938.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

