Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FBD94_02945 | Not Available | Negative | 768464 - 768727 | 10169.0 |
| arac family transcriptional regulator | FBD94_02950 | Not Available | Negative | 769089 - 769907 | 32025.7 |
| sugar o-acetyltransferase | FBD94_02955 | Not Available | Positive | 770020 - 770586 | 20447.6 |
| alpha/beta hydrolase | FBD94_02960 | Not Available | Positive | 770589 - 771740 | 42754.4 |
| cupin domain-containing protein | FBD94_02965 | Not Available | Positive | 771682 - 772167 | 17703.2 |
| hypothetical protein | FBD94_02970 | Not Available | Positive | 772216 - 772674 | 16268.1 |
| chemotaxis protein cheb | FBD94_02975 | Not Available | Positive | 773325 - 774356 | 37390.4 |
| hypothetical protein | FBD94_02980 | Not Available | Negative | 774465 - 774665 | 7952.44 |
| duf1016 domain-containing protein | FBD94_02985 | Not Available | Positive | 775024 - 776028 | 39153.8 |
| hypothetical protein | FBD94_02990 | Not Available | Positive | 776143 - 777129 | 37487.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

