Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2851 family protein | FBD94_02890 | Not Available | Positive | 756647 - 757927 | 49231.5 |
| pspc domain-containing protein | FBD94_02895 | Not Available | Positive | 757929 - 758150 | 8794.16 |
| hypothetical protein | FBD94_02900 | Not Available | Negative | 758151 - 758795 | 22842.5 |
| dna translocase ftsk | FBD94_02905 | Not Available | Positive | 758954 - 761527 | 96429.5 |
| outer membrane lipoprotein carrier protein lola | FBD94_02910 | Not Available | Positive | 761545 - 762192 | 24250.2 |
| mbl fold metallo-hydrolase | FBD94_02915 | Not Available | Positive | 762232 - 762996 | 28485.3 |
| Trna-leu | Not Available | Not Available | Positive | 763018 - 763101 | Not Available |
| hypothetical protein | FBD94_02925 | Not Available | Negative | 763459 - 763815 | 13581.1 |
| duf4369 domain-containing protein | FBD94_02935 | Not Available | Negative | 764753 - 765511 | 28573.3 |
| discoidin domain-containing protein | FBD94_02940 | Not Available | Negative | 765618 - 767672 | 79287.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

