Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-e domain-containing protein | FBD94_02640 | Not Available | Negative | 704772 - 705704 | 35896.2 |
| circularly permuted type 2 atp-grasp protein | FBD94_02645 | Not Available | Negative | 705735 - 707186 | 54501.4 |
| transglutaminase family protein | FBD94_02650 | Not Available | Positive | 707385 - 708227 | 31336.5 |
| transcriptional regulator | FBD94_02655 | Not Available | Positive | 708324 - 708830 | 19408.4 |
| duf393 domain-containing protein | FBD94_02660 | Not Available | Positive | 708838 - 709650 | 31150.8 |
| tigr01777 family protein | FBD94_02665 | Not Available | Positive | 709661 - 710584 | 34529.9 |
| hypothetical protein | FBD94_02670 | Not Available | Positive | 710599 - 711510 | 34523.3 |
| hypothetical protein | FBD94_02675 | Not Available | Positive | 711539 - 711940 | 15496.7 |
| hypothetical protein | FBD94_02680 | Not Available | Positive | 711963 - 712394 | 16180.4 |
| hypothetical protein | FBD94_02685 | Not Available | Positive | 712396 - 713223 | 30888.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

