Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FBD94_00180 | Not Available | Positive | 40531 - 41265 | 27973.0 |
| hypothetical protein | FBD94_00185 | Not Available | Negative | 42058 - 42267 | 7800.41 |
| hypothetical protein | FBD94_00190 | Not Available | Positive | 42315 - 43034 | 26603.9 |
| transposase | FBD94_00195 | Not Available | Positive | 43406 - 43759 | 13428.4 |
| transposase | FBD94_00200 | Not Available | Positive | 43800 - 44735 | 36045.7 |
| Trna-met | Not Available | Not Available | Positive | 44840 - 44913 | Not Available |
| hypothetical protein | FBD94_00210 | Not Available | Positive | 45301 - 45681 | 14914.5 |
| yjgp/yjgq family permease | FBD94_00215 | Not Available | Positive | 45712 - 47151 | 53935.8 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | FBD94_00220 | Not Available | Positive | 47299 - 48510 | 44080.2 |
| translocation/assembly module tamb | FBD94_00225 | Not Available | Negative | 48515 - 52915 | 164135.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

