Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s protein assembly co-chaperone hscb | FBD94_02390 | Not Available | Positive | 631067 - 631606 | 20409.3 |
| duf3817 domain-containing protein | FBD94_02395 | Not Available | Positive | 631687 - 631971 | 10908.8 |
| Trna-leu | Not Available | Not Available | Positive | 632032 - 632114 | Not Available |
| hypothetical protein | FBD94_02405 | Not Available | Positive | 632289 - 632606 | 12224.9 |
| rna polymerase sigma-70 factor | FBD94_02410 | Not Available | Positive | 633124 - 633792 | 25901.2 |
| duf4974 domain-containing protein | FBD94_02415 | Not Available | Positive | 633865 - 635067 | 45225.0 |
| susc/raga family tonb-linked outer membrane protein | FBD94_02420 | Not Available | Positive | 635221 - 638901 | 135527.0 |
| ragb/susd family nutrient uptake outer membrane protein | FBD94_02425 | Not Available | Positive | 638913 - 640463 | 58088.0 |
| redoxin domain-containing protein | FBD94_02430 | Not Available | Positive | 640598 - 644470 | 145347.0 |
| alpha-mannosidase | FBD94_02435 | Not Available | Negative | 645397 - 648330 | 109238.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

