Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone dnaj | FBD94_02190 | Not Available | Negative | 578578 - 579750 | 41891.6 |
| nucleotide exchange factor grpe | FBD94_02195 | Not Available | Negative | 579757 - 580371 | 23228.4 |
| atp-binding cassette domain-containing protein | FBD94_02200 | Not Available | Negative | 580500 - 581183 | 25354.9 |
| fructose-6-phosphate aldolase | FBD94_02205 | Not Available | Negative | 581186 - 581389 | 7761.65 |
| t9ss type b sorting domain-containing protein | FBD94_02210 | Not Available | Negative | 581467 - 583404 | 69510.9 |
| acyl-coa reductase | FBD94_02215 | Not Available | Negative | 583436 - 584458 | 38306.6 |
| 4fe-4s dicluster domain-containing protein | FBD94_02220 | Not Available | Positive | 584536 - 584886 | 12823.7 |
| universal stress protein | FBD94_02225 | Not Available | Negative | 585051 - 585506 | 16596.8 |
| nlpc/p60 family protein | FBD94_02230 | Not Available | Positive | 585639 - 586421 | 28944.4 |
| hypothetical protein | FBD94_02235 | Not Available | Positive | 586528 - 592485 | 225526.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

