Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glu/leu/phe/val dehydrogenase | FBD94_02135 | Not Available | Positive | 569298 - 570719 | 51611.1 |
| cytochrome c maturation protein ccme | FBD94_02140 | Not Available | Positive | 570896 - 571348 | 17095.4 |
| cytochrome c biogenesis protein | FBD94_02145 | Not Available | Positive | 571354 - 573822 | 93150.9 |
| duf2520 domain-containing protein | FBD94_02150 | Not Available | Positive | 573895 - 574653 | 28271.4 |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | FBD94_02155 | Not Available | Positive | 574696 - 575028 | 12118.4 |
| fe-s cluster assembly protein iscx | FBD94_02160 | Not Available | Positive | 575051 - 575293 | 9800.32 |
| had-iiia family hydrolase | FBD94_02165 | Not Available | Positive | 575298 - 575825 | 19155.1 |
| hypothetical protein | FBD94_02170 | Not Available | Positive | 575944 - 576348 | 14600.9 |
| septum formation protein maf | FBD94_02175 | Not Available | Positive | 576451 - 577020 | 20550.7 |
| exopolyphosphatase | FBD94_02185 | Not Available | Negative | 577612 - 578532 | 32621.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

