Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s protein assembly chaperone hsca | FBD94_02035 | Not Available | Negative | 548988 - 550844 | 67915.3 |
| hypothetical protein | FBD94_02040 | Not Available | Positive | 551145 - 552065 | 35891.6 |
| duf3810 domain-containing protein | FBD94_02045 | Not Available | Negative | 552076 - 553149 | 41685.7 |
| dihydroorotase | FBD94_02050 | Not Available | Negative | 553149 - 554483 | 49515.2 |
| dead/deah box helicase | FBD94_02055 | Not Available | Positive | 554652 - 555980 | 49483.2 |
| hypothetical protein | FBD94_02060 | Not Available | Positive | 555987 - 556262 | 10165.3 |
| gliding motility protein gldc | FBD94_02065 | Not Available | Positive | 556262 - 556597 | 12953.4 |
| hypothetical protein | FBD94_02070 | Not Available | Positive | 556600 - 557013 | 14965.1 |
| duf421 domain-containing protein | FBD94_02075 | Not Available | Negative | 556997 - 557512 | 19149.6 |
| methylated-dna--[protein]-cysteine s-methyltransferase | FBD94_02080 | Not Available | Negative | 557531 - 558022 | 18368.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

