Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | FBD94_01985 | Not Available | Negative | 539039 - 540196 | 44461.4 |
| hypothetical protein | FBD94_01990 | Not Available | Negative | 540480 - 540779 | 11821.0 |
| hypothetical protein | FBD94_01995 | Not Available | Positive | 541347 - 541985 | 23662.7 |
| hypothetical protein | FBD94_02000 | Not Available | Positive | 542455 - 542973 | 18572.2 |
| gliding motility-associated abc transporter permease subunit gldf | FBD94_02005 | Not Available | Positive | 543013 - 543741 | 27087.7 |
| gliding motility-associated abc transporter substrate-binding protein gldg | FBD94_02010 | Not Available | Positive | 543735 - 545408 | 62351.6 |
| dna polymerase iii subunit beta | FBD94_02015 | Not Available | Positive | 545444 - 546568 | 41387.4 |
| duf4397 domain-containing protein | FBD94_02020 | Not Available | Positive | 546581 - 547279 | 24837.5 |
| deda family protein | FBD94_02025 | Not Available | Positive | 547374 - 548069 | 25831.3 |
| s1/p1 nuclease | FBD94_02030 | Not Available | Negative | 548085 - 548948 | 33637.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

