Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anion permease | FBD94_01935 | Not Available | Positive | 527071 - 528501 | 51948.2 |
| succinate dehydrogenase cytochrome b subunit | FBD94_01940 | Not Available | Positive | 528511 - 529194 | 26067.2 |
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | FBD94_01945 | Not Available | Positive | 529185 - 531101 | 71054.1 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | FBD94_01950 | Not Available | Positive | 531113 - 531856 | 27230.7 |
| galactose oxidase | FBD94_01955 | Not Available | Positive | 532039 - 533205 | 42620.1 |
| glycine--trna ligase | FBD94_01960 | Not Available | Negative | 533316 - 534803 | 57810.7 |
| atp-binding cassette domain-containing protein | FBD94_01965 | Not Available | Positive | 534896 - 535600 | 25927.0 |
| port family protein | FBD94_01970 | Not Available | Positive | 535840 - 536466 | 21424.6 |
| hypothetical protein | FBD94_01975 | Not Available | Positive | 536612 - 537130 | 18227.7 |
| abc-f family atp-binding cassette domain-containing protein | FBD94_01980 | Not Available | Positive | 537323 - 538954 | 61864.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

