Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarylacetoacetate hydrolase family protein | FBD94_01885 | Not Available | Positive | 516510 - 517505 | 36662.9 |
| flavin reductase family protein | FBD94_01890 | Not Available | Positive | 517509 - 518396 | 32470.1 |
| nlpc/p60 family protein | FBD94_01895 | Not Available | Negative | 518391 - 518927 | 19678.7 |
| sdr family oxidoreductase | FBD94_01900 | Not Available | Negative | 518990 - 519691 | 24961.4 |
| aromatic amino acid hydroxylase | FBD94_01905 | Not Available | Negative | 519821 - 521605 | 67236.6 |
| gtra family protein | FBD94_01910 | Not Available | Negative | 521696 - 522187 | 18896.5 |
| lta synthase family protein | FBD94_01915 | Not Available | Negative | 522192 - 524120 | 74014.6 |
| flavodoxin reductase | FBD94_01920 | Not Available | Positive | 524307 - 524975 | 25019.3 |
| cap domain-containing protein | FBD94_01925 | Not Available | Negative | 525134 - 525826 | 26730.3 |
| porin | FBD94_01930 | Not Available | Positive | 525944 - 527059 | 42350.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

