Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| port family protein | FBD94_01735 | Not Available | Positive | 481942 - 483117 | 42953.8 |
| ycei family protein | FBD94_01740 | Not Available | Positive | 483092 - 483652 | 20574.4 |
| hypothetical protein | FBD94_01745 | Not Available | Positive | 483661 - 484599 | 35038.9 |
| rieske (2fe-2s) protein | FBD94_01750 | Not Available | Positive | 484617 - 485078 | 15482.5 |
| hypothetical protein | FBD94_01755 | Not Available | Positive | 485127 - 485786 | 25312.9 |
| peptidyl-dipeptidase dcp | FBD94_01760 | Not Available | Negative | 485944 - 488088 | 80203.8 |
| hypothetical protein | FBD94_01765 | Not Available | Negative | 488171 - 488971 | 30176.8 |
| duf4595 domain-containing protein | FBD94_01770 | Not Available | Positive | 489273 - 490022 | 27550.8 |
| rna polymerase sigma-70 factor | FBD94_01775 | Not Available | Positive | 490198 - 490758 | 21665.2 |
| fecr family protein | FBD94_01780 | Not Available | Positive | 490859 - 492073 | 45222.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

