Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin acylase family protein | FBD94_01685 | Not Available | Negative | 463901 - 466339 | 91965.9 |
| tonb-dependent receptor | FBD94_01690 | Not Available | Positive | 466504 - 469368 | 103565.0 |
| glycoside hydrolase family 31 protein | FBD94_01695 | Not Available | Positive | 469536 - 472004 | 95820.5 |
| 1,4-alpha-glucan branching protein glgb | FBD94_01700 | Not Available | Positive | 472004 - 473914 | 73497.3 |
| chat domain-containing protein | FBD94_01705 | Not Available | Negative | 473889 - 476612 | 102998.0 |
| hypothetical protein | FBD94_01710 | Not Available | Negative | 476600 - 478687 | 77902.1 |
| hypothetical protein | FBD94_01715 | Not Available | Negative | 478803 - 479795 | 34798.3 |
| sigma-70 family rna polymerase sigma factor | FBD94_01720 | Not Available | Positive | 479973 - 480542 | 21841.2 |
| hypothetical protein | FBD94_01725 | Not Available | Positive | 480542 - 481285 | 28250.5 |
| rna polymerase sigma factor | FBD94_01730 | Not Available | Positive | 481380 - 481913 | 21004.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

