Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FBD94_16855 | Not Available | Positive | 4259915 - 4260502 | 22483.8 |
| hypothetical protein | FBD94_16860 | Not Available | Positive | 4260486 - 4261202 | 27708.3 |
| hypothetical protein | FBD94_16865 | Not Available | Negative | 4261221 - 4261529 | 11367.5 |
| c-type cytochrome | FBD94_16870 | Not Available | Negative | 4261631 - 4264312 | 99135.6 |
| sugar phosphate isomerase/epimerase | FBD94_16875 | Not Available | Negative | 4264324 - 4265202 | 32935.4 |
| duf4142 domain-containing protein | FBD94_16880 | Not Available | Negative | 4265865 - 4266521 | 23737.4 |
| hypothetical protein | FBD94_16885 | Not Available | Negative | 4266583 - 4267230 | 23689.6 |
| yihy/virulence factor brkb family protein | FBD94_16890 | Not Available | Negative | 4267404 - 4268348 | 34327.5 |
| sigma-70 family rna polymerase sigma factor | FBD94_16895 | Not Available | Negative | 4268437 - 4268961 | 20630.8 |
| dipeptidase pepe | FBD94_16900 | Not Available | Positive | 4269158 - 4269715 | 20725.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

