Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3800 domain-containing protein | FBD94_16705 | Not Available | Negative | 4222177 - 4223310 | 43633.3 |
| hypothetical protein | FBD94_16710 | Not Available | Negative | 4223450 - 4224034 | 23234.0 |
| hypothetical protein | FBD94_16715 | Not Available | Negative | 4224078 - 4224584 | 18585.6 |
| hypothetical protein | FBD94_16720 | Not Available | Negative | 4224869 - 4225114 | 9103.0 |
| hypothetical protein | FBD94_16725 | Not Available | Negative | 4225561 - 4227840 | 88231.4 |
| hypothetical protein | FBD94_16730 | Not Available | Negative | 4227842 - 4229032 | 45951.9 |
| hypothetical protein | FBD94_16735 | Not Available | Positive | 4229210 - 4230331 | 43789.9 |
| hypothetical protein | FBD94_16740 | Not Available | Positive | 4230451 - 4234986 | 176148.0 |
| nucleotide pyrophosphohydrolase | FBD94_16745 | Not Available | Negative | 4235141 - 4235473 | 12994.5 |
| hypothetical protein | FBD94_16750 | Not Available | Negative | 4235484 - 4236494 | 38425.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

