Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FBD94_16090 | Not Available | Negative | 4071871 - 4072308 | 16341.9 |
| exo-alpha-sialidase | FBD94_16095 | Not Available | Negative | 4072348 - 4073619 | 46211.1 |
| tonb-dependent receptor | FBD94_16100 | Not Available | Negative | 4073625 - 4075931 | 84673.5 |
| hypothetical protein | FBD94_16105 | Not Available | Negative | 4076188 - 4076559 | 14022.4 |
| acyl-coa thioesterase | FBD94_16110 | Not Available | Negative | 4076588 - 4076974 | 14424.4 |
| ketoacyl-acp synthase iii | FBD94_16115 | Not Available | Negative | 4076975 - 4077988 | 36828.0 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | FBD94_16120 | Not Available | Negative | 4078046 - 4080364 | 88022.5 |
| hypothetical protein | FBD94_16125 | Not Available | Positive | 4080841 - 4081350 | 18567.4 |
| hamp domain-containing protein | FBD94_16130 | Not Available | Negative | 4081347 - 4083101 | 66426.3 |
| sensor protein kdpd | FBD94_16135 | Not Available | Negative | 4083286 - 4084416 | 42977.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

