Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FBD94_01535 | Not Available | Negative | 432597 - 432791 | 7377.15 |
| m1 family metallopeptidase | FBD94_01540 | Not Available | Positive | 432900 - 434480 | 60147.1 |
| hypothetical protein | FBD94_01545 | Not Available | Negative | 434668 - 435183 | 19445.3 |
| duf1269 domain-containing protein | FBD94_01550 | Not Available | Positive | 435298 - 435900 | 21603.7 |
| type i glyceraldehyde-3-phosphate dehydrogenase | FBD94_01555 | Not Available | Positive | 436042 - 437037 | 35764.8 |
| gnat family n-acetyltransferase | FBD94_01560 | Not Available | Positive | 437030 - 437461 | 15797.8 |
| phosphoglycerate kinase | FBD94_01565 | Not Available | Positive | 437504 - 438697 | 42629.3 |
| division/cell wall cluster transcriptional repressor mraz | FBD94_01570 | Not Available | Positive | 438899 - 439372 | 17836.5 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | FBD94_01575 | Not Available | Positive | 439362 - 440267 | 33882.8 |
| hypothetical protein | FBD94_01580 | Not Available | Positive | 440264 - 440686 | 16263.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

