Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | FBD94_15890 | Not Available | Positive | 4027654 - 4028352 | 26345.6 |
| ompa family protein | FBD94_15895 | Not Available | Positive | 4028518 - 4029198 | 23082.7 |
| hypothetical protein | FBD94_15900 | Not Available | Negative | 4029291 - 4029635 | 13340.3 |
| oxidoreductase | FBD94_15905 | Not Available | Positive | 4029764 - 4030777 | 37932.4 |
| zinc-dependent peptidase | FBD94_15910 | Not Available | Positive | 4030781 - 4031563 | 29711.6 |
| alpha/beta hydrolase | FBD94_15915 | Not Available | Negative | 4031566 - 4032555 | 36880.1 |
| duf4372 domain-containing protein | FBD94_15920 | Not Available | Positive | 4032775 - 4032985 | 8006.84 |
| duf1398 domain-containing protein | FBD94_15925 | Not Available | Positive | 4033627 - 4034202 | 21866.0 |
| ytxh domain-containing protein | FBD94_15930 | Not Available | Positive | 4034585 - 4034974 | 14431.2 |
| mfs transporter | FBD94_15935 | Not Available | Negative | 4035035 - 4036186 | 42211.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

