Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glpgli family protein | FBD94_15790 | Not Available | Positive | 4006820 - 4007590 | 28643.8 |
| response regulator transcription factor | FBD94_15795 | Not Available | Negative | 4007587 - 4008282 | 26569.4 |
| hamp domain-containing histidine kinase | FBD94_15800 | Not Available | Negative | 4008282 - 4010117 | 70189.7 |
| duf1016 domain-containing protein | FBD94_15805 | Not Available | Negative | 4010224 - 4011246 | 39874.6 |
| duf3127 domain-containing protein | FBD94_15810 | Not Available | Negative | 4011451 - 4011819 | 13579.9 |
| class i sam-dependent rna methyltransferase | FBD94_15815 | Not Available | Positive | 4011892 - 4013085 | 44796.9 |
| hd domain-containing protein | FBD94_15820 | Not Available | Positive | 4013104 - 4013751 | 24165.0 |
| sensor histidine kinase | FBD94_15825 | Not Available | Positive | 4013824 - 4014849 | 39421.8 |
| duf47 domain-containing protein | FBD94_15830 | Not Available | Positive | 4014930 - 4015577 | 24251.2 |
| inorganic phosphate transporter | FBD94_15835 | Not Available | Positive | 4015588 - 4016601 | 35801.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

