Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | FBD94_15690 | Not Available | Negative | 3978806 - 3979987 | 44308.9 |
| ketoacyl-acp synthase iii | FBD94_15695 | Not Available | Negative | 3980039 - 3981085 | 38254.8 |
| atp-dependent clp protease adaptor clps | FBD94_15700 | Not Available | Positive | 3981166 - 3981447 | 10911.0 |
| thioredoxin family protein | FBD94_15705 | Not Available | Negative | 3981434 - 3982033 | 22612.3 |
| tonb-dependent receptor | FBD94_15710 | Not Available | Positive | 3982126 - 3984615 | 92322.9 |
| tonb-dependent receptor | FBD94_15715 | Not Available | Positive | 3984672 - 3987059 | 87645.8 |
| nudix hydrolase | FBD94_15720 | Not Available | Positive | 3987094 - 3987648 | 20935.8 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | FBD94_15725 | Not Available | Positive | 3987672 - 3988424 | 28504.1 |
| response regulator transcription factor | FBD94_15730 | Not Available | Negative | 3988421 - 3989173 | 28590.1 |
| hypothetical protein | FBD94_15735 | Not Available | Negative | 3989170 - 3990204 | 39929.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

