Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rdd family protein | FBD94_15640 | Not Available | Positive | 3969905 - 3970648 | 27558.1 |
| sgnh/gdsl hydrolase family protein | FBD94_15645 | Not Available | Negative | 3970649 - 3971335 | 25014.0 |
| duf2752 domain-containing protein | FBD94_15650 | Not Available | Negative | 3971510 - 3971836 | 12265.4 |
| hypothetical protein | FBD94_15655 | Not Available | Negative | 3971837 - 3972307 | 16899.8 |
| lipoyl(octanoyl) transferase lipb | FBD94_15660 | Not Available | Negative | 3972392 - 3973087 | 26691.9 |
| 4'-phosphopantetheinyl transferase superfamily protein | FBD94_15665 | Not Available | Negative | 3973098 - 3973739 | 24651.7 |
| dctp deaminase | FBD94_15670 | Not Available | Positive | 3973807 - 3974343 | 20103.2 |
| tonb-dependent receptor | FBD94_15675 | Not Available | Positive | 3974424 - 3977123 | 99625.8 |
| enoyl-coa hydratase/isomerase family protein | FBD94_15680 | Not Available | Positive | 3977133 - 3977894 | 27986.9 |
| sdr family oxidoreductase | FBD94_15685 | Not Available | Positive | 3977898 - 3978773 | 31316.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

