Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FBD94_15540 | Not Available | Negative | 3941957 - 3943753 | 67662.2 |
| hypothetical protein | FBD94_15545 | Not Available | Negative | 3943804 - 3945588 | 67714.7 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | FBD94_15550 | Not Available | Positive | 3945718 - 3947145 | 53699.9 |
| sigma-54-dependent fis family transcriptional regulator | FBD94_15555 | Not Available | Positive | 3947156 - 3948388 | 46040.0 |
| hypothetical protein | FBD94_15560 | Not Available | Positive | 3948391 - 3948891 | 18369.1 |
| hypothetical protein | FBD94_15565 | Not Available | Positive | 3948925 - 3950031 | 42108.0 |
| preprotein translocase subunit secg | FBD94_15570 | Not Available | Positive | 3950044 - 3950388 | 11631.4 |
| co-chaperone groes | FBD94_15575 | Not Available | Positive | 3950603 - 3950893 | 10202.2 |
| chaperonin groel | FBD94_15580 | Not Available | Positive | 3950999 - 3952636 | 57682.5 |
| pkd domain-containing protein | FBD94_15585 | Not Available | Positive | 3952771 - 3959382 | 235072.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

