Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylate kinase | FBD94_01485 | Not Available | Positive | 420663 - 421232 | 20960.1 |
| gtpase obge | FBD94_01490 | Not Available | Positive | 421307 - 422308 | 36091.5 |
| srpbcc domain-containing protein | FBD94_01495 | Not Available | Negative | 422437 - 422865 | 16431.4 |
| peptidase domain-containing abc transporter | FBD94_01500 | Not Available | Negative | 422958 - 425123 | 80737.0 |
| hlyd family efflux transporter periplasmic adaptor subunit | FBD94_01505 | Not Available | Negative | 425132 - 426301 | 44131.0 |
| hypothetical protein | FBD94_01510 | Not Available | Negative | 426374 - 426610 | 7835.61 |
| hypothetical protein | FBD94_01515 | Not Available | Positive | 426873 - 427169 | 11254.4 |
| fad-binding oxidoreductase | FBD94_01520 | Not Available | Positive | 427272 - 430076 | 103347.0 |
| hypothetical protein | FBD94_01525 | Not Available | Negative | 430146 - 430370 | 8619.3 |
| duf2075 domain-containing protein | FBD94_01530 | Not Available | Positive | 430685 - 432595 | 71200.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

