Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FBD94_15440 | Not Available | Negative | 3917480 - 3917956 | 17657.5 |
| hypothetical protein | FBD94_15445 | Not Available | Negative | 3917943 - 3918305 | 13140.5 |
| hypothetical protein | FBD94_15450 | Not Available | Negative | 3918293 - 3919531 | 46048.7 |
| hypothetical protein | FBD94_15455 | Not Available | Negative | 3919538 - 3920146 | 23595.7 |
| hypothetical protein | FBD94_15460 | Not Available | Negative | 3920143 - 3920649 | 19128.6 |
| hypothetical protein | FBD94_15465 | Not Available | Negative | 3920651 - 3921592 | 35801.2 |
| phosphoribosylamine--glycine ligase | FBD94_15470 | Not Available | Positive | 3922015 - 3923286 | 45620.9 |
| hypothetical protein | FBD94_15475 | Not Available | Negative | 3923363 - 3923803 | 16760.4 |
| ahpc/tsa family protein | FBD94_15480 | Not Available | Negative | 3924163 - 3925299 | 40793.0 |
| arginase | FBD94_15485 | Not Available | Negative | 3925390 - 3926571 | 44456.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

