Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FBD94_15390 | Not Available | Negative | 3901181 - 3901516 | 12572.0 |
| hypothetical protein | FBD94_15395 | Not Available | Negative | 3901522 - 3907536 | 215864.0 |
| hypothetical protein | FBD94_15400 | Not Available | Negative | 3907567 - 3907944 | 14297.5 |
| hypothetical protein | FBD94_15405 | Not Available | Negative | 3907955 - 3908362 | 15682.1 |
| hypothetical protein | FBD94_15410 | Not Available | Negative | 3908403 - 3914234 | 214203.0 |
| hypothetical protein | FBD94_15415 | Not Available | Negative | 3914247 - 3914831 | 22197.0 |
| omph family outer membrane protein | FBD94_15420 | Not Available | Negative | 3914831 - 3915394 | 21646.2 |
| hypothetical protein | FBD94_15425 | Not Available | Negative | 3915419 - 3915817 | 15144.5 |
| hypothetical protein | FBD94_15430 | Not Available | Negative | 3916005 - 3916319 | 12216.1 |
| type ii secretion system f family protein | FBD94_15435 | Not Available | Negative | 3916338 - 3917477 | 43422.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

