Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative sulfate exporter family transporter | FBD94_15340 | Not Available | Positive | 3884458 - 3885399 | 33472.3 |
| hypothetical protein | FBD94_15345 | Not Available | Negative | 3885425 - 3885676 | 9625.37 |
| rhs repeat-associated core domain-containing protein | FBD94_15350 | Not Available | Negative | 3885690 - 3890540 | 179004.0 |
| hypothetical protein | FBD94_15355 | Not Available | Negative | 3890580 - 3894242 | 137731.0 |
| hypothetical protein | FBD94_15360 | Not Available | Negative | 3894797 - 3895324 | 19819.3 |
| hypothetical protein | FBD94_15365 | Not Available | Negative | 3895328 - 3896545 | 45411.4 |
| general secretion pathway protein gspd | FBD94_15370 | Not Available | Negative | 3896547 - 3898466 | 70679.2 |
| type ii/iv secretion system protein | FBD94_15375 | Not Available | Negative | 3898508 - 3899938 | 53473.7 |
| hypothetical protein | FBD94_15380 | Not Available | Negative | 3899913 - 3900425 | 19474.6 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | FBD94_15385 | Not Available | Negative | 3900425 - 3900844 | 15557.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

