Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protoheme ix farnesyltransferase | FBD94_15185 | Not Available | Negative | 3848666 - 3849544 | 32485.8 |
| heme a synthase | FBD94_15190 | Not Available | Negative | 3849556 - 3850620 | 39514.3 |
| cytochrome c oxidase subunit i | FBD94_15195 | Not Available | Negative | 3850709 - 3852484 | 66262.9 |
| cytochrome c oxidase subunit ii | FBD94_15200 | Not Available | Negative | 3852613 - 3853842 | 46176.5 |
| quinol:cytochrome c oxidoreductase | FBD94_15205 | Not Available | Negative | 3853911 - 3855125 | 46100.4 |
| cytochrome c | FBD94_15210 | Not Available | Negative | 3855137 - 3855745 | 22042.2 |
| duf3341 domain-containing protein | FBD94_15215 | Not Available | Negative | 3855717 - 3856253 | 20118.3 |
| hydrogenase | FBD94_15220 | Not Available | Negative | 3856256 - 3857728 | 55687.2 |
| 4fe-4s dicluster domain-containing protein | FBD94_15225 | Not Available | Negative | 3857760 - 3860831 | 112604.0 |
| c-type cytochrome | FBD94_15230 | Not Available | Negative | 3860878 - 3862173 | 47850.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

