Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose 3,5-epimerase | FBD94_15135 | Not Available | Positive | 3842768 - 3843322 | 21323.9 |
| hypothetical protein | FBD94_15140 | Not Available | Negative | 3843384 - 3844226 | 31498.0 |
| duf2461 domain-containing protein | FBD94_15145 | Not Available | Negative | 3844338 - 3845000 | 25464.5 |
| duf983 domain-containing protein | FBD94_15150 | Not Available | Negative | 3844997 - 3845395 | 15206.5 |
| hypothetical protein | FBD94_15155 | Not Available | Negative | 3845410 - 3845658 | 8890.05 |
| duf420 domain-containing protein | FBD94_15160 | Not Available | Negative | 3845697 - 3846230 | 19969.5 |
| redoxin domain-containing protein | FBD94_15165 | Not Available | Negative | 3846246 - 3846953 | 26828.4 |
| caa(3)-type oxidase | FBD94_15170 | Not Available | Negative | 3846953 - 3847309 | 13649.2 |
| cytochrome oxidase subunit iii | FBD94_15175 | Not Available | Negative | 3847330 - 3848037 | 26807.9 |
| heme-copper oxidase subunit iii | FBD94_15180 | Not Available | Negative | 3848068 - 3848658 | 21707.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

