Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin-like domain-containing protein | FBD94_15085 | Not Available | Positive | 3830304 - 3831185 | 33486.5 |
| vwa domain-containing protein | FBD94_15090 | Not Available | Positive | 3831269 - 3832366 | 41542.4 |
| magnesium chelatase | FBD94_15095 | Not Available | Positive | 3832393 - 3833871 | 56319.1 |
| metallophosphoesterase | FBD94_15100 | Not Available | Positive | 3833908 - 3835167 | 47362.2 |
| hypothetical protein | FBD94_15105 | Not Available | Positive | 3835187 - 3836077 | 33666.9 |
| response regulator transcription factor | FBD94_15110 | Not Available | Negative | 3836074 - 3836763 | 26521.2 |
| hamp domain-containing histidine kinase | FBD94_15115 | Not Available | Negative | 3836768 - 3838435 | 63940.3 |
| s9 family peptidase | FBD94_15120 | Not Available | Negative | 3838448 - 3840340 | 72688.7 |
| tetratricopeptide repeat protein | FBD94_15125 | Not Available | Positive | 3840635 - 3842443 | 69098.0 |
| duf4286 family protein | FBD94_15130 | Not Available | Positive | 3842459 - 3842761 | 11543.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

