Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent oxidoreductase | FBD94_01435 | Not Available | Positive | 409042 - 409905 | 30452.0 |
| hypothetical protein | FBD94_01440 | Not Available | Negative | 409902 - 410369 | 17587.5 |
| arac family transcriptional regulator | FBD94_01445 | Not Available | Negative | 410437 - 411234 | 31002.2 |
| hypothetical protein | FBD94_01450 | Not Available | Positive | 411316 - 411951 | 23848.7 |
| peptidylprolyl isomerase | FBD94_01455 | Not Available | Positive | 411978 - 412652 | 25089.6 |
| tlpa family protein disulfide reductase | FBD94_01460 | Not Available | Negative | 412708 - 413232 | 19692.2 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | FBD94_01465 | Not Available | Negative | 413241 - 414788 | 57752.9 |
| susc/raga family tonb-linked outer membrane protein | FBD94_01470 | Not Available | Negative | 414806 - 418309 | 129386.0 |
| fecr family protein | FBD94_01475 | Not Available | Negative | 418451 - 419563 | 41064.4 |
| rna polymerase sigma-70 factor | FBD94_01480 | Not Available | Negative | 419640 - 420218 | 22581.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

